The detailed information of tRNA gene sequence


Sequence ID>WENV170009999
Genome IDAPMI01006775
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 448
End posion on genome 534
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
caatcgacac
tRNA gene sequence 
GCGGGTGTGGCGGAATTGGTAGACGCAGCGGACTCAAAATCCGCCGTTGGCAACAACTTG
TCGGTTCGAGTCCGACCACCCGTACCA
Downstream region at tRNA end position 
agctcatgac
Secondary structure (Cloverleaf model)
>WENV170009999	Leu	CAA
                   c      ACCA agctcatgac
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G T C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGTTGGCAACAACTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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