The detailed information of tRNA gene sequence


Sequence ID>WENV170010004
Genome IDAPMI01006861
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 18350
End posion on genome 18435
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taactatgat
tRNA gene sequence 
GGGAGGATGGCTGAGTGGTTGAAGGTGTCGGTCTTGAAAATCGAAGGGTATTAATTACCT
CGCAGGTTCGAATCCTGTTCCTCTCTtgg
Downstream region at tRNA end position 
cgactgtagc
Secondary structure (Cloverleaf model)
>WENV170010004	Ser	TGA
                   t      Ttgg cgactgtagc
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         + | +                 T T
    T       A G G T
      T G A        G     AGGGTATTAATTACCTC
                    T - A
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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