The detailed information of tRNA gene sequence


Sequence ID>WENV170010008
Genome IDAPMI01006861
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 18720
End posion on genome 18793
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aaaagtgcgc
tRNA gene sequence 
GGGCGCATAGCTCAATTTGGTAGAGCGGTGGCCTTTTAAGCCAAGGGTTCTAGGTTCGAG
TCCTAGTGCGCCTAttt
Downstream region at tRNA end position 
tatgtgtgaa
Secondary structure (Cloverleaf model)
>WENV170010008	Lys	TTT
                   c      Attt tatgtgtgaa
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          T G
                    T     G A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       C T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     GGGTT
                    G   A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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