The detailed information of tRNA gene sequence


Sequence ID>WENV170010012
Genome IDAPMI01006861
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 19166
End posion on genome 19250
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agatttttag
tRNA gene sequence 
GGGAGGATGGCTGAGTGGTTTAAGGCGATACTTTGCTAAGGTGTTTGCCCGACGGGCAGC
GTGGGTTCGAATCCCACTCCTTCTAatt
Downstream region at tRNA end position 
gtgtattgat
Secondary structure (Cloverleaf model)
>WENV170010012	Ser	GCT
                   g      Aatt gtgtattgat
                     G + T
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TTGCCCGACGGGCAGC
                    A - T
                    T + G
                    A - T
                    C - G
                    T + G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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