The detailed information of tRNA gene sequence


Sequence ID>WENV170010013
Genome IDAPMI01006861
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 19273
End posion on genome 19354
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tagcgctcgc
tRNA gene sequence 
GCTCGCTTGGCGGAATGGTAGACGCGGTAGACTCAAAATCTATTTCTTTTTAAGAGTGTC
GGTTCAAGTCCGATAGCGGGTAtac
Downstream region at tRNA end position 
tgttagattt
Secondary structure (Cloverleaf model)
>WENV170010013	Leu	CAA
                   c      Atac tgttagattt
                     G + T
                     C - G
                     T + G
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     T A G C C     A
      T A A        G      + | | | |     A
    G       G G C G       G T C G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TTCTTTTTAAGAGT
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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