The detailed information of tRNA gene sequence


Sequence ID>WENV170010020
Genome IDAPMI01006861
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 19954
End posion on genome 20025
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttattttttt
tRNA gene sequence 
GGGTGTCTAGCATAGTGGTTATGCGGTGGATTGCAAATCCATGTTAGAGTGGTTCGATTC
CACTGTCACTCTgct
Downstream region at tRNA end position 
atcggatgtt
Secondary structure (Cloverleaf model)
>WENV170010020	Cys	GCA
                   t      Tgct atcggatgtt
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     T   T
                     C - G          T T
                    T     T C A C C     A
        G A        A      | | | | |     G
      T     T A C G       A G T G G     C
      G     | | | |                 T T
      G     A T G C
        T T        G     GTTAG
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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