The detailed information of tRNA gene sequence


Sequence ID>WENV170010022
Genome IDAPMI01006904
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 4352
End posion on genome 4428
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ccagccgttc
tRNA gene sequence 
GGACGTGTAGCTCAGTTGGTTAGAGCGTTCGCTTCACACGCGAGAGGTCGGGGGTTCGAG
TCCCTCCACGTCCACCC
Downstream region at tRNA end position 
cacgcacaag
Secondary structure (Cloverleaf model)
>WENV170010022	Val	CAC
                   c      ACCC cacgcacaag
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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