The detailed information of tRNA gene sequence


Sequence ID>WENV170010030
Genome IDAPMI01007009
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1349
End posion on genome 1273
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cctcgctttc
tRNA gene sequence 
GGGCCCGTAGCTCAGATGGATAGAGCAGCAGCCTTCTAAGCTGCTGGTCGCTGGTTCGAA
TCCAGCCGGGCTCGCCA
Downstream region at tRNA end position 
ttgatttcat
Secondary structure (Cloverleaf model)
>WENV170010030	Arg	TCT
                   c      GCCA ttgatttcat
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G A C C     A
      A G A        A      | | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    G - C
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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