The detailed information of tRNA gene sequence


Sequence ID>WENV170010035
Genome IDAPMI01007156
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 5571
End posion on genome 5496
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acactggttc
tRNA gene sequence 
GCCGCTTTAGCTCAGCCGGTAGAGCACATCATTCGTAATGATGGGGTCAGGTGTTCGAGT
CACCTAAGCGGCACCA
Downstream region at tRNA end position 
gtgcttccac
Secondary structure (Cloverleaf model)
>WENV170010035	Thr	CGT
                   c      ACCA gtgcttccac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T C C A C     A
      C G A        A      | | | | |     G
    C       C T C G       A G G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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