The detailed information of tRNA gene sequence


Sequence ID>WENV170010040
Genome IDAPMI01007384
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 17368
End posion on genome 17439
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttaaatacca
tRNA gene sequence 
GCTCTAGTCGTTCAACGGTTAGGACAACAGACTTTCAATTTGTAGATTCGGGTTCAATTC
CCGGCTAGAGCAagt
Downstream region at tRNA end position 
acgtttttaa
Secondary structure (Cloverleaf model)
>WENV170010040	Glu	TTC
                   a      Aagt acgtttttaa
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     A - T
                     G - C          T T
                    T     G G C C C     A
      C A A        C      + | | | |     A
    G       C T T G       T C G G G     C
    G       | + | |                 T T
    T       G G A C
      T A          A     AGAT
                    A - T
                    C - G
                    A - T
                    G + T
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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