The detailed information of tRNA gene sequence


Sequence ID>WENV170010043
Genome IDAPMI01007384
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 7836
End posion on genome 7766
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taattaatta
tRNA gene sequence 
TGGGGAATAGTTTAATGGTAAAACCCCAGTCTTCAAAACTGGTATTACGGGTTCGACTCC
TGTTTCCTCAGaat
Downstream region at tRNA end position 
atgttaacaa
Secondary structure (Cloverleaf model)
>WENV170010043	SeC	TCA
                   a      Gaat atgttaacaa
                     T - A
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     T G T C C     A
        A A        A      | | + | |     G
      T     T T T G       A C G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        C     TATT
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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