The detailed information of tRNA gene sequence


Sequence ID>WENV170010057
Genome IDAPMI01007575
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 340
End posion on genome 429
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacagaatta
tRNA gene sequence 
GGTGGGTTGGCAGAGCGGTTGAATGCACTAGTCTTGAAAACTAGCAAGGATGTAAGTCCT
TCCAGGGTTCGAATCCCTGACCCACCGCCA
Downstream region at tRNA end position 
aaacgagagc
Secondary structure (Cloverleaf model)
>WENV170010057	Ser	TGA
                   a      GCCA aaacgagagc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGATGTAAGTCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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