The detailed information of tRNA gene sequence


Sequence ID>WENV170010071
Genome IDAPMI01007750
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 4690
End posion on genome 4617
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaacacagct
tRNA gene sequence 
GGTCCTGTGGCCGAGTGGCTAGGCAGAGCTCTGCAAAAGCTCGTACAGCAGTTCGAATCT
GCTCGGGACCTCCA
Downstream region at tRNA end position 
agcctctttc
Secondary structure (Cloverleaf model)
>WENV170010071	Cys	GCA
                   t      TCCA agcctctttc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T C G T C     A
        G A        G      | | | | |     G
      T     G C C G       A G C A G     C
      G       | | |                 T T
      G     A G G C
        C T        A     GTAC
                    G - C
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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