The detailed information of tRNA gene sequence


Sequence ID>WENV170010087
Genome IDAPMI01008219
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2444
End posion on genome 2517
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgcgaccgct
tRNA gene sequence 
GCCCCCGTAGCATGAAGGTCGTGCAGTTGCCTTGTAAGCATCAGGTCCTGGTTCGATTCC
GGGCGGGGGCACCA
Downstream region at tRNA end position 
gatcgtggcg
Secondary structure (Cloverleaf model)
>WENV170010087	Thr	TGT
                   t      ACCA gatcgtggcg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     G G G C C     A
        A G        A      | | + | |     G
      A     T A C G       C C T G G     C
      G     + | | |                 T T
      G     G T G C
        T C        A     AGGT
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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