The detailed information of tRNA gene sequence


Sequence ID>WENV170010099
Genome IDAPMI01008488
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 10892
End posion on genome 10817
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgcgcgccgg
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCGTCTCGTTTACACCGAGAATGTCGGGGGTTCGAGT
CCCTCACCGCCCACCA
Downstream region at tRNA end position 
gttccccatg
Secondary structure (Cloverleaf model)
>WENV170010099	Val	TAC
                   g      ACCA gttccccatg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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