The detailed information of tRNA gene sequence


Sequence ID>WENV170010103
Genome IDAPMI01008519
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 789
End posion on genome 861
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
catggcgtaa
tRNA gene sequence 
TCCGCCTTGGTGTAATGGCAGCACGACAGCCTTTGGAGCTGTTAGGTCTAGGTTCGAGTC
CTGGAGGCGGAGCat
Downstream region at tRNA end position 
tgctgttcac
Secondary structure (Cloverleaf model)
>WENV170010103	Gln	TTG
                   a      GCat tgctgttcac
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T G
                    T     G G T C C     A
        A A        G      | + | | |     G
      T     T G T G       C T A G G     C
      G     + | | |                 T T
      G     G C A C
        C A        G     TAGGT
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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