The detailed information of tRNA gene sequence


Sequence ID>WENV170010109
Genome IDAPMI01008703
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2304
End posion on genome 2394
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acgtgtggac
tRNA gene sequence 
GGTGCGTTGGCTCGAGCGGTTTAAGGCAGCCGGTTGTCAACCGGCCAAGGAGTGATGTCC
TTCGGGGGTTCGAATCCCTCACGCACCGCCA
Downstream region at tRNA end position 
cttgaagact
Secondary structure (Cloverleaf model)
>WENV170010109	Asp	GTC
                   c      GCCA cttgaagact
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     C T C C C     A
    C G A G        G      | + | | |     G
  G         C T C G       G G G G G     C
  G           + | |                 T T
  T         A G G C
    T T A          A     CAAGGAGTGATGTCCTTC
                    G - C
                    C - G
                    C - G
                    G - C
                    G - C
                  T       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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