The detailed information of tRNA gene sequence


Sequence ID>WENV170010117
Genome IDAPMI01009042
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 5122
End posion on genome 5047
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgacttccat
tRNA gene sequence 
GCGGCAGTAGCTCAGTTGGATAGAGCACCGGCCTTCTAAGCCGGGGGTCGGTGGGTTCGA
GTCCTCCCTGCCGCGCtt
Downstream region at tRNA end position 
tcttgatggc
Secondary structure (Cloverleaf model)
>WENV170010117	Arg	TCT
                   t      GCtt tcttgatggc
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        A      |   + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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