The detailed information of tRNA gene sequence


Sequence ID>WENV170010120
Genome IDAPMI01009081
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1114
End posion on genome 1205
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagttcttag
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGCCGAAAGGGCCGGTTTGCTAAACCGTTGTACGAGCTTAAACT
TGTACCGAGGGTTCGAATCCCTCCCTCACCGCag
Downstream region at tRNA end position 
agtaaaaaga
Secondary structure (Cloverleaf model)
>WENV170010120	Ser	GCT
                   g      GCag agtaaaaaga
                     G - C
                     G - C
                     A   A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        G     TGTACGAGCTTAAACTTGTACC
                    C   T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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