The detailed information of tRNA gene sequence


Sequence ID>WENV170010122
Genome IDAPMI01009151
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 5516
End posion on genome 5441
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gccattttgt
tRNA gene sequence 
GCCGCGGTAGCTCAGTCGGTAGAGCATAGCACTGAAAATGCTAGGGTCACCGGTTCAAGT
CCGGTCTGCGGCACCA
Downstream region at tRNA end position 
tcgttaattc
Secondary structure (Cloverleaf model)
>WENV170010122	Phe	GAA
                   t      ACCA tcgttaattc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G + T
                     G - C          T G
                    T     T G G C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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