The detailed information of tRNA gene sequence


Sequence ID>WENV170010140
Genome IDAPMI01009519
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1040
End posion on genome 1116
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tatgacttaa
tRNA gene sequence 
CGGGATGTGGCGCAGCCTGGTAGCGCGCACGGCTGGGGGCCGTGAGGTCGCAAGTTCAAG
TCTTGTCATCCCGACCA
Downstream region at tRNA end position 
ggaatcaaat
Secondary structure (Cloverleaf model)
>WENV170010140	Pro	GGG
                   a      ACCA ggaatcaaat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T G T T C     A
      C G A        G      + | | | |     A
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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