The detailed information of tRNA gene sequence


Sequence ID>WENV170010143
Genome IDAPMI01009568
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 296
End posion on genome 223
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aagtggttgc
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCTGAAGCCTTCCAAGCTTAAGACGAGGGTTCGATTCC
CTTCGCCCGCTCCA
Downstream region at tRNA end position 
tattgcggct
Secondary structure (Cloverleaf model)
>WENV170010143	Gly	TCC
                   c      TCCA tattgcggct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     AGAC
                    G   A
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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