The detailed information of tRNA gene sequence


Sequence ID>WENV170010159
Genome IDAPMI01009972
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 75
End posion on genome 1
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aactaatact
tRNA gene sequence 
GGTTCGGTAGTTCAGTTGGTTAGAATACGTGCCTGTCACGCACGGGGTCGCGGGTTCGAG
TCCCGTCCGGACCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170010159	Asp	GTC
                   t      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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