The detailed information of tRNA gene sequence


Sequence ID>WENV170010185
Genome IDAPMI01010428
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1317
End posion on genome 1227
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttaccatt
tRNA gene sequence 
GGAGAGATGGGTGAGTGGCTGAAACCAACAGTTTGCTAAACTGTCGTACTCGATTAGGGT
ACCGGGGGTTCGAATCCCCCTTTCTCCGCCA
Downstream region at tRNA end position 
gttctttatt
Secondary structure (Cloverleaf model)
>WENV170010185	Ser	GCT
                   t      GCCA gttctttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGATTAGGGTACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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