The detailed information of tRNA gene sequence


Sequence ID>WENV170010232
Genome IDAPMI01011160
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 112449
End posion on genome 112357
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatctacaat
tRNA gene sequence 
GGAGGAGTACCCAAGTGGCTGAAGGGGACGGTTTGCTAAATCGTTAGTATGGGGAGACCT
GTAGCGGGAGTTCGAATCTCCCCTCCTCCGCCA
Downstream region at tRNA end position 
agaagagaag
Secondary structure (Cloverleaf model)
>WENV170010232	Ser	GCT
                   t      GCCA agaagagaag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     G
    G       A C C C       G G G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGTATGGGGAGACCTGTAGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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