The detailed information of tRNA gene sequence


Sequence ID>WENV170010260
Genome IDAPMI01011770
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 222
End posion on genome 296
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cggaatcgca
tRNA gene sequence 
CGGGGCGTAGCTTAGCCCGGTAGAGCGCCTGCTTCGGGAGCAGGAGGTCGCTGGTTCAAA
TCCAGTCGCCCCGACtg
Downstream region at tRNA end position 
agaatagaga
Secondary structure (Cloverleaf model)
>WENV170010260	Pro	CGG
                   a      ACtg agaatagaga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     A
    C       T T C G       G C T G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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