The detailed information of tRNA gene sequence


Sequence ID>WENV170010266
Genome IDAPMI01012026
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1038
End posion on genome 1112
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aaagtaaact
tRNA gene sequence 
GGTCCCGTAGTTCAATGGATAGAATAGAAGTTTCCTAAACTTTTGATACAGGTTCGATTC
CTGTCGGGACTACCA
Downstream region at tRNA end position 
gagaggacaa
Secondary structure (Cloverleaf model)
>WENV170010266	Arg	CCT
                   t      ACCA gagaggacaa
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C T T G       A C A G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     TGAT
                    G + T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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