The detailed information of tRNA gene sequence


Sequence ID>WENV170010293
Genome IDAPMI01012791
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2117
End posion on genome 2205
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaatattcc
tRNA gene sequence 
GGAGAGTTGGCAGAGGGGGTAATGCGGTAGCCTGCTAAGCTATACATCGTTTATTCGGTG
CAAAGGTTCGAGTCCTTTACTCTCCGCAA
Downstream region at tRNA end position 
cattgtttga
Secondary structure (Cloverleaf model)
>WENV170010293	Ser	GCT
                   c      GCAA cattgtttga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T G
                    T     T T T C C     A
      G G A        G      | | | | |     G
    G       G A C G       A A A G G     C
    G         | | |                 T T
    G       A T G C
      T A          G     ACATCGTTTATTCGGTGC
                    G + T
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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