The detailed information of tRNA gene sequence


Sequence ID>WENV170010330
Genome IDAPMI01013915
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 5156
End posion on genome 5081
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctgcgttgac
tRNA gene sequence 
CGGGGCGTAGCGTAGCGGCCAGCGCGCTGCTTTTGGGTGGCAGAGATCGCGGGTTCGAGT
CCCGCCGCCCCGACCA
Downstream region at tRNA end position 
cgtggcccgt
Secondary structure (Cloverleaf model)
>WENV170010330	Pro	TGG
                   c      ACCA cgtggcccgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | | | | |     G
    G       T G C G       G C G G G     C
    G       + | | |                 T T
    C       G C G C
      C A          G     AGATC
                    C - G
                    T - A
                    G - C
                    C - G
                    T + G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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