The detailed information of tRNA gene sequence


Sequence ID>WENV170010343
Genome IDAPMI01014340
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1034
End posion on genome 1107
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaataaaaa
tRNA gene sequence 
AGCGGAGAAGAGCAAATGGTTAGCTCGTCAGGCTCATAATCTGAAGGTTGTAGGTTCGAG
TCCTACCTCCGCTCtaa
Downstream region at tRNA end position 
catgccacaa
Secondary structure (Cloverleaf model)
>WENV170010343	Met	CAT
                   a      Ctaa catgccacaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    A     C A T C C     A
      A A A        A      | | | | |     G
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T T A        G     AGGTT
                    T - A
                    C - G
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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