The detailed information of tRNA gene sequence


Sequence ID>WENV170010361
Genome IDAPMI01014751
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3871
End posion on genome 3780
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatcttact
tRNA gene sequence 
GGAGAGGTGTCTGAGCGGTTGAAAGAGCACGCTTGGAAAGCGTGTGTGCGGGGCAACTCG
TACCGTGGGTTCAAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
tagaaaaata
Secondary structure (Cloverleaf model)
>WENV170010361	Ser	GGA
                   t      GCCA tagaaaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      + | | | |     A
    G       G T C T       G T G G G     C
    G         | | |                 T T
    T       A A G A
      T G A        G     TGTGCGGGGCAACTCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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