The detailed information of tRNA gene sequence


Sequence ID>WENV170010374
Genome IDAPMI01015233
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1019
End posion on genome 1093
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cagtggaaaa
tRNA gene sequence 
GCCGTTGTAGCTCAGTGGCAGAGCACTTCCTTGGTAAGGAAGAGGTCAAGGGTTCAATTC
CCTTTAACGGCTCAA
Downstream region at tRNA end position 
tactggtttt
Secondary structure (Cloverleaf model)
>WENV170010374	Thr	GGT
                   a      TCAA tactggtttt
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     G + T          T T
                    T     T T C C C     A
        G A        A      | | | | |     A
      T     C T C G       A A G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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