The detailed information of tRNA gene sequence


Sequence ID>WENV170010404
Genome IDAPMI01016097
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1945
End posion on genome 1861
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcaacaacaA
tRNA gene sequence 
GACACTTTGGCCGAGCGGCAAAGGCGTTCCTCTGATTAAACAATCCCCAAACCAGATCGT
GGGTTCGAGTCCCACAGGTGTCTTtt
Downstream region at tRNA end position 
tcatgacgct
Secondary structure (Cloverleaf model)
>WENV170010404	Ile	GAT
                   A      TTtt tcatgacgct
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T G
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      A A          G     TCCCCAAACCAGATC
                    T - A
                    T - A
                    C   C
                    C   A
                    T - A
                  C       A
                  T       T
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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