The detailed information of tRNA gene sequence


Sequence ID>WENV170010408
Genome IDAPMI01016269
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 4225
End posion on genome 4301
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctgctcgcgc
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGCACCTGCCTTCTAAGCTGGTGGTCGCAGGTTCGAA
TCCTGCCGGGCGCGCCA
Downstream region at tRNA end position 
atttttcaat
Secondary structure (Cloverleaf model)
>WENV170010408	Arg	TCT
                   c      GCCA atttttcaat
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    C - G
                    C - G
                    T   T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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