The detailed information of tRNA gene sequence


Sequence ID>WENV170010437
Genome IDAPMI01017087
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 303
End posion on genome 227
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcgccgctct
tRNA gene sequence 
CGGGGTGTAGCGCAGTCCGGTAGCGCGCTTGCTTTGGGAGCAAGATGTCGGGAGTTCGAA
TCTCTCCACCCCGACCA
Downstream region at tRNA end position 
aagcttaacc
Secondary structure (Cloverleaf model)
>WENV170010437	Pro	TGG
                   t      ACCA aagcttaacc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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