The detailed information of tRNA gene sequence


Sequence ID>WENV170010444
Genome IDAPMI01017257
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 3989
End posion on genome 4078
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcccctgc
tRNA gene sequence 
GGAGGATTCGCATAGCGGCCTAGTGCGCACGATTGGAAATCGTGTTGGGGATGAAACCCC
TCGCGGGTTCAAATCCCGCATCCTCCGCCA
Downstream region at tRNA end position 
ctgtgatgtc
Secondary structure (Cloverleaf model)
>WENV170010444	Ser	GGA
                   c      GCCA ctgtgatgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C G C C C     A
      C G A        C      | | | | |     A
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGGATGAAACCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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