The detailed information of tRNA gene sequence


Sequence ID>WENV170010477
Genome IDAPMI01018096
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 296
End posion on genome 225
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgaattggcg
tRNA gene sequence 
CGGGCGGTAGCTTAACTGGTAGAGTCTTGGTCTCCAAAACCAATTGTGAGGGTTCGATTC
CCTCTTGCCCGGtgg
Downstream region at tRNA end position 
ttgaacgttt
Secondary structure (Cloverleaf model)
>WENV170010477	Trp	CCA
                   g      Gtgg ttgaacgttt
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G + T          T T
                    T     C T C C C     A
      C A A        A      | | | | |     G
    T       T T C G       G A G G G     C
    G       + | | +                 T T
    G       G A G T
      T A          C     TTGT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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