The detailed information of tRNA gene sequence


Sequence ID>WENV170010518
Genome IDAPMI01019301
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2919
End posion on genome 2833
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
attttcttgt
tRNA gene sequence 
GCCGCGGTGGTGGAATTGGTAGACACGTTAGACTCAAAATCTGATGTCCAATAGGACGTA
CCGGTTCAAGTCCGGTCCGCGGTACCA
Downstream region at tRNA end position 
gaaagtatgt
Secondary structure (Cloverleaf model)
>WENV170010518	Leu	CAA
                   t      ACCA gaaagtatgt
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G G C C     A
      T A A        G      | | | | |     A
    T       G G T G       A C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGTCCAATAGGACGT
                    T - A
                    T + G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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