The detailed information of tRNA gene sequence


Sequence ID>WENV170010522
Genome IDAPMI01019329
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 16
End posion on genome 91
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cacgcagtgc
tRNA gene sequence 
GGGCTCGTAGCTCAGTCGGTAGAGCAACGGACTTTTAATCTGTAGGTCCCGGGTTCGAAT
CCCGGCGAGCCCACCA
Downstream region at tRNA end position 
ctgcgcatgg
Secondary structure (Cloverleaf model)
>WENV170010522	Lys	TTT
                   c      ACCA ctgcgcatgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    G + T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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