The detailed information of tRNA gene sequence


Sequence ID>WENV170010550
Genome IDAPMI01020157
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 5382
End posion on genome 5309
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttttatac
tRNA gene sequence 
ACGGGAATAGTTCAATGGTAGAATAGAGGTCTCCAAAACCTTTGATCAGGGTTCGAATCC
TTGTTCCCGTGCAA
Downstream region at tRNA end position 
ataatcagat
Secondary structure (Cloverleaf model)
>WENV170010550	Trp	CCA
                   c      GCAA ataatcagat
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G T T C C     A
        A A        A      | | + | |     G
      T     C T T G       C A G G G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     TGAT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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