The detailed information of tRNA gene sequence


Sequence ID>WENV170010583
Genome IDAPMI01021292
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2617
End posion on genome 2690
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcggcagcat
tRNA gene sequence 
GGCCCCGTTGTGTAGTGGCCTAGCACGCCGCCCTCTCAAGGCGGTAGCGCCGGTTCGAAT
CCGGTCGGGGCTACat
Downstream region at tRNA end position 
cagcgcaagg
Secondary structure (Cloverleaf model)
>WENV170010583	Glu	CTC
                   t      ACat cagcgcaagg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      T G A        T      + | | | |     G
    G       T G T G       G C C G G     C
    G       + | | |                 T T
    C       G C A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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