The detailed information of tRNA gene sequence


Sequence ID>WENV170010598
Genome IDAPMI01021933
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 4777
End posion on genome 4701
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cagttatcat
tRNA gene sequence 
CGGGGTGTAGCTCAACTTGGCGGAGCGCCTGCCTTGGGCGCAGGAGGCCCCTGGTTCAAA
TCCAGGTACCCCGACCA
Downstream region at tRNA end position 
cacttactta
Secondary structure (Cloverleaf model)
>WENV170010598	Pro	TGG
                   t      ACCA cacttactta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T          T A
                    T     G G A C C     A
      C A A        A      | | | | |     A
    T       C T C G       C C T G G     C
    T       | | | |                 T T
    G       G A G C
      G C G        G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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