The detailed information of tRNA gene sequence


Sequence ID>WENV170010615
Genome IDAPMI01022583
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 542
End posion on genome 615
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttactagtcc
tRNA gene sequence 
GCCTCAGTAGCTCAGTGGATAGAGCACCGCTCTCCTAAAGCGGGTGTCGGAAGTTCGATT
CTTCTCTGGGGCACtt
Downstream region at tRNA end position 
catttgcgaa
Secondary structure (Cloverleaf model)
>WENV170010615	Arg	CCT
                   c      ACtt catttgcgaa
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T T
                    T     T C T T C     A
      T G A        A      + | | | |     G
    G       C T C G       G G A A G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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