The detailed information of tRNA gene sequence


Sequence ID>WENV170010618
Genome IDAPMI01022717
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 2751
End posion on genome 2677
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgtgcgcgtt
tRNA gene sequence 
GGGCCGCTAGCTCAATGGCAGAGCACGTCGCTCATAACGACTTGGTTGCAGGTTCGAATC
CTGCGCGGCCCACCA
Downstream region at tRNA end position 
ctccacagaa
Secondary structure (Cloverleaf model)
>WENV170010618	Met	CAT
                   t      ACCA ctccacagaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T A
                    T     C G T C C     A
        A A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTT
                    C   T
                    G - C
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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