The detailed information of tRNA gene sequence


Sequence ID>WENV170010666
Genome IDAPMI01024514
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 301
End posion on genome 225
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cgatgcgcgg
tRNA gene sequence 
GCCGCCTTAGCTCAGTTGGTTAGAGCGCCGGTTTGTGGAACCGGAGGTCCTCAGTTCAAG
CCTGAGAGGCGGTACCA
Downstream region at tRNA end position 
tcgcaaagcg
Secondary structure (Cloverleaf model)
>WENV170010666	His	GTG
                   g      ACCA tcgcaaagcg
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          C G
                    T     G A G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C T C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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