The detailed information of tRNA gene sequence


Sequence ID>WENV170010674
Genome IDAPMI01024823
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1347
End posion on genome 1271
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcgaggtcgt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGCGTTCGGGACGCAGGGGTCGCAAGTTCGAA
TCCTGTCACTCCGACCA
Downstream region at tRNA end position 
aaatgcaaag
Secondary structure (Cloverleaf model)
>WENV170010674	Pro	CGG
                   t      ACCA aaatgcaaag
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | |   |     G
    C       C T C G       G C A A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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