The detailed information of tRNA gene sequence


Sequence ID>WENV170010691
Genome IDAPMI01025437
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1484
End posion on genome 1574
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttaataca
tRNA gene sequence 
GGTGAGGTGGGAGAGTGGCCGAATCCAATAGTTTGCTAAACTGTCGTACGCCTTAACAGT
GTACCGCGGGTTCGAATCCCGCCCTCACCGCat
Downstream region at tRNA end position 
agtattatta
Secondary structure (Cloverleaf model)
>WENV170010691	Ser	GCT
                   a      GCat agtattatta
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A G G       G C G G G     C
    G         | | |                 T T
    C       A T C C
      C G A        A     CGTACGCCTTAACAGTGTACC
                    A - T
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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