The detailed information of tRNA gene sequence


Sequence ID>WENV170010699
Genome IDAPMI01025612
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 402
End posion on genome 475
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
ccagccatgc
tRNA gene sequence 
TGGGGAATAGTTCAACGGTAGAACGACGGACTCTGACTCCGTTAATCTTGGTTCGAATCC
AGGTTCCCCAGCCA
Downstream region at tRNA end position 
attctcgcta
Secondary structure (Cloverleaf model)
>WENV170010699	Gln	CTG
                   c      GCCA attctcgcta
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G G A C C     A
        A A        A      | + | | |     G
      C     C T T G       C T T G G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     TAAT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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