The detailed information of tRNA gene sequence


Sequence ID>WENV170010707
Genome IDAPMI01025797
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1211
End posion on genome 1135
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcggcgcagt
tRNA gene sequence 
CGGAGTGTAGCGCAGTCTGGTAGCGCACCTCGTTCGGGACGAGGGGGTCGTAGGTTCGAA
TCCTATCACTCCGACCA
Downstream region at tRNA end position 
ttttcttaat
Secondary structure (Cloverleaf model)
>WENV170010707	Pro	CGG
                   t      ACCA ttttcttaat
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T A T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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