The detailed information of tRNA gene sequence


Sequence ID>WENV170010738
Genome IDAPMI01026845
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 199
End posion on genome 110
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agagtaccac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGACTCGAAATCGTGTATGCGTGCAAACGTA
TCGGGGGTTCGAATCCCCCCTTCTCCGCCA
Downstream region at tRNA end position 
ataaaatagc
Secondary structure (Cloverleaf model)
>WENV170010738	Ser	CGA
                   c      GCCA ataaaatagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATGCGTGCAAACGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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